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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
73
candidate regulatory elements
46
target gene predictions
38
chromatin state
10
accessible chromatin
5
binding sites
5
histone modifications
3
eQTL
3
gene expression
Date released
104
September, 2022
48
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
January, 2022
3
March, 2024
1
March, 2020
October, 2022
Available data
142
bed bed3+
35
bed bed9
3
bigWig
3
tsv
Organism
183
Homo sapiens
Biosample type
144
tissue
33
cell line
6
primary cell
Organ
943
epithelium
650
kidney
460
brain
447
connective tissue
372
musculature of body
307
lung
288
intestine
276
pancreas
262
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
88
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
177
AMP
6
ENCODE
Genome assembly (visualization)
177
hg19
46
GRCh38
month_released!
January, 2018
October, 2022
BIOSAMPLE
TYPE
183 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
vagina
4
2
2
1
1
+ See 8 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
RKO
1
1
1
1
HCT-116 cell
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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