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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
296
candidate regulatory elements
256
gene expression
236
target gene predictions
226
accessible chromatin
158
chromatin state
92
differential activity
58
binding sites
41
variant allelic effects
37
histone modifications
6
eQTL
2
caQTL
Date released
453
September, 2022
310
February, 2021
155
September, 2023
127
November, 2021
79
February, 2024
43
May, 2021
38
June, 2020
38
March, 2023
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
11
October, 2022
9
February, 2020
8
April, 2020
8
March, 2020
7
August, 2017
6
August, 2018
5
March, 2024
5
October, 2019
3
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
899
bed bed3+
327
tsv
177
bigWig
151
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1408
Homo sapiens
Biosample type
836
primary cell
376
tissue
170
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
459
connective tissue
375
musculature of body
311
lung
289
intestine
276
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1096
AMP
155
KPMP
127
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
1053
hg19
340
GRCh38
month_released!
January, 2018
BIOSAMPLE
TYPE
1408 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
7
15
2
2
1
1
2
hepatocyte
1
13
3
8
1
1
2
4
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
2
1
1
endothelial cell of umbilical vein
6
4
2
5
2
1
+ See 148 more…
tissue
lung
33
1
17
16
1
large intestine
27
14
1
13
1
left lung
26
13
13
right lung
22
11
1
11
sigmoid colon
10
7
1
5
+ See 31 more…
cell line
A549
21
19
1
18
2
1
EndoC_BH1
8
1
8
3
1
IMR-90
2
2
1
1
2
1
HT-29
2
2
1
1
1
1
PC-9
2
2
1
1
1
1
+ See 21 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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