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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
100
candidate regulatory elements
57
target gene predictions
14
accessible chromatin
6
binding sites
5
histone modifications
3
chromatin state
3
variant allelic effects
Date released
91
September, 2022
64
February, 2021
8
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
January, 2020
3
May, 2020
1
March, 2020
1
October, 2022
Available data
188
bed bed3+
46
bed bed9
6
bigWig
2
tsv
Organism
188
Homo sapiens
Biosample type
152
tissue
30
cell line
6
primary cell
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
182
AMP
6
ENCODE
Genome assembly (visualization)
188
hg19
11
GRCh38
month_released!
January, 2018
BIOSAMPLE
TYPE
188 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
binding sites
histone modifications
chromatin state
variant allelic effects
tissue
large intestine
27
14
1
1
renal pelvis
19
9
2
1
sigmoid colon
10
7
1
transverse colon
8
5
1
left renal pelvis
6
2
1
1
+ See 7 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
3
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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