Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
gene expression
45
accessible chromatin
32
candidate regulatory elements
32
target gene predictions
31
differential activity
21
chromatin state
16
eQTL
12
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
56
September, 2022
45
March, 2023
35
February, 2021
34
May, 2021
26
February, 2024
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
January, 2022
5
June, 2020
4
January, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
January, 2018
1
June, 2021
1
March, 2024
Available data
136
bed bed3+
76
tsv
36
bigWig
17
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
257
Homo sapiens
Biosample type
133
tissue
89
primary cell
32
cell line
3
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
383
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
236
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
88
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
257
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
167
hg19
48
GRCh38
month_released!
January, 2018
BIOSAMPLE
TYPE
257 results
search-icon
table-tab-icon
Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
10
6
1
3
13
1
1
2
2
2
2
body of pancreas
2
8
5
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
thyroid gland
1
8
5
4
1
endocrine pancreas
7
4
4
+ See 8 more…
primary cell
pancreatic ductal cell
3
3
1
3
1
2
1
pancreatic beta cell
3
4
1
3
1
pancreatic alpha cell
3
3
1
3
1
pancreatic acinar cell
3
2
1
3
1
pancreatic delta cell
3
2
1
3
1
+ See 12 more…
cell line
EndoC_BH1
8
8
1
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download