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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
68
accessible chromatin
55
target gene predictions
52
candidate regulatory elements
47
gene expression
33
differential activity
27
chromatin state
15
eQTL
12
binding sites
11
histone modifications
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
74
September, 2022
59
February, 2021
47
March, 2023
34
May, 2021
25
February, 2024
20
January, 2021
18
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
7
June, 2020
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
3
August, 2017
2
February, 2020
2
November, 2019
2
October, 2022
1
April, 2019
1
February, 2023
January, 2018
1
June, 2021
Available data
213
bed bed3+
75
tsv
57
bigWig
23
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
340
Homo sapiens
Biosample type
167
primary cell
115
tissue
49
cell line
9
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
459
connective tissue
375
musculature of body
311
lung
289
intestine
276
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
300
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
250
hg19
71
GRCh38
month_released!
January, 2018
BIOSAMPLE
TYPE
340 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
differential activity
chromatin state
eQTL
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
primary cell
foreskin keratinocyte
4
11
4
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
foreskin fibroblast
1
2
6
1
4
2
+ See 15 more…
tissue
islet of Langerhans
6
1
10
3
13
2
1
1
2
2
2
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 7 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
EH
1
2
1
EL
1
2
1
ELR
1
2
1
+ See 5 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
pancreatic ductal cell
3
See all biosamples
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