Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
48
binding sites
34
target gene predictions
25
histone modifications
24
candidate regulatory elements
14
accessible chromatin
5
chromatin state
2
eQTL
1
gene expression
1
variant allelic effects
Date released
77
February, 2021
September, 2022
28
February, 2024
20
October, 2022
13
June, 2020
5
May, 2021
3
August, 2017
2
August, 2021
2
January, 2020
2
May, 2020
1
March, 2020
1
March, 2024
Available data
148
bed bed3+
2
bed bed9
2
bigBed bed9
1
bigWig
1
tsv
Organism
154
Homo sapiens
Biosample type
128
cell line
23
primary cell
3
tissue
Organ
798
epithelium
427
kidney
339
connective tissue
286
brain
232
pancreas
191
vasculature
171
musculature of body
147
heart
144
blood vessel
143
bodily fluid
138
blood
134
embryo
125
intestine
110
liver
106
limb
102
skin of body
101
lung
82
eye
76
large intestine
71
uterus
64
adipose tissue
54
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
154
AMP
Genome assembly (visualization)
152
hg19
31
GRCh38
month_released!
January, 2018
September, 2022
BIOSAMPLE
TYPE
154 results
search-icon
table-tab-icon
Clear Filters
binding sites
target gene predictions
histone modifications
candidate regulatory elements
accessible chromatin
chromatin state
eQTL
gene expression
variant allelic effects
cell line
K562
2
17
1
1
1
1
GM12878
2
7
1
1
1
1
GM06990
2
1
1
1
GM19240
2
1
1
1
HAP-1
1
1
1
1
1
+ See 24 more…
primary cell
endothelial cell of umbilical vein
2
2
4
2
3
1
peripheral blood mononuclear cell
1
1
4
peripheral blood stem cell
1
1
1
tissue
blood
2
whole blood
1
See all biosamples
Download