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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1328
target gene predictions
977
histone modifications
944
chromatin state
881
accessible chromatin
817
binding sites
683
gene expression
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
68
eQTL
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
65
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
871
bed bed3+
496
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
836
Homo sapiens
Biosample type
455
primary cell
197
tissue
163
cell line
66
in vitro differentiated cells
Organ
202
epithelium
87
connective tissue
59
eye
55
pancreas
50
kidney
41
brain
36
vasculature
27
musculature of body
26
blood vessel
26
heart
24
liver
21
intestine
20
limb
15
lung
14
bone element
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
bone marrow
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
639
AMP
222
ENCODE
19
LungMap
1
T1D
Genome assembly (visualization)
873
hg19
388
GRCh38
month_released!
January, 2021
January, 2022
BIOSAMPLE
TYPE
881 results
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Clear Filters
accessible chromatin
primary cell
monocyte
17
fibroblast
16
endothelial cell
14
excitatory neuron
12
macrophage
11
+ See 210 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
islet of Langerhans
6
heart
5
+ See 95 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
+ See 27 more…
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