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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1328
target gene predictions
977
histone modifications
938
chromatin state
820
accessible chromatin
817
binding sites
666
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
January, 2021
26
May, 2021
25
February, 2023
19
April, 2020
14
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
810
bed bed3+
435
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
775
Homo sapiens
Biosample type
435
primary cell
162
cell line
157
tissue
66
in vitro differentiated cells
Organ
190
epithelium
78
connective tissue
57
eye
53
pancreas
36
kidney
26
vasculature
24
brain
22
liver
22
musculature of body
21
blood vessel
21
intestine
17
heart
15
lung
14
bone element
14
limb
13
skin of body
12
blood
12
bodily fluid
12
embryo
10
large intestine
9
artery
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
adipose tissue
4
esophagus
4
lymphatic vessel
4
placenta
3
bronchus
3
penis
3
small intestine
3
uterus
2
lymphoid tissue
2
nerve
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
bone marrow
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
ureter
1
urinary bladder
Project
578
AMP
222
ENCODE
19
LungMap
1
T1D
Genome assembly (visualization)
812
hg19
330
GRCh38
month_released!
January, 2021
January, 2020
BIOSAMPLE
TYPE
820 results
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Clear Filters
accessible chromatin
primary cell
monocyte
17
fibroblast
16
endothelial cell
14
excitatory neuron
12
macrophage
11
+ See 198 more…
cell line
EndoC_BH1
8
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
+ See 147 more…
tissue
retina
22
pigmented layer of retina
20
kidney
8
islet of Langerhans
6
liver
4
+ See 82 more…
in vitro differentiated cells
neural progenitor cell
10
embryonic stem cell
6
retinal pigment epithelial cell
6
chondrocyte
5
adipocyte
4
+ See 29 more…
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