Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
435
accessible chromatin
9
gene expression
4
variant allelic effects
3
target gene predictions
2
chromatin state
Date released
222
November, 2021
January, 2020
53
May, 2020
38
February, 2024
January, 2021
20
August, 2021
19
April, 2020
19
February, 2023
14
February, 2021
13
May, 2021
12
November, 2019
11
November, 2022
9
October, 2019
7
May, 2022
4
January, 2022
4
September, 2022
3
September, 2018
2
May, 2019
2
November, 2020
1
June, 2021
Available data
5801
bed bed3+
883
tsv
863
bed bed9
453
bigWig
108
txt
34
bed bed9+
34
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
409
Homo sapiens
Biosample type
361
primary cell
80
tissue
9
in vitro differentiated cells
3
cell line
Organ
154
epithelium
45
connective tissue
45
pancreas
34
eye
22
kidney
21
liver
21
vasculature
18
blood vessel
13
heart
11
intestine
11
musculature of body
9
bone element
9
lung
8
limb
8
skeleton
7
artery
6
adrenal gland
5
skin of body
5
stomach
3
brain
3
extraembryonic component
3
large intestine
3
lymphatic vessel
3
mammary gland
2
adipose tissue
2
bronchus
2
embryo
2
esophagus
2
placenta
2
small intestine
1
bone marrow
1
gonad
1
nerve
1
ovary
1
spleen
1
thymus
1
thyroid gland
1
uterus
1
vein
Project
222
ENCODE
212
AMP
19
LungMap
Genome assembly (visualization)
444
hg19
320
GRCh38
month_released!
January, 2021
January, 2020
BIOSAMPLE
TYPE
453 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
variant allelic effects
target gene predictions
chromatin state
primary cell
monocyte
15
fibroblast
14
endothelial cell
12
excitatory neuron
12
hepatocyte
6
5
+ See 157 more…
tissue
retina
15
pigmented layer of retina
13
kidney
7
1
islet of Langerhans
4
coronary artery
2
1
+ See 34 more…
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
retinal pigment epithelial cell
2
adipocyte
1
cardiac precursors
1
excitatory neuron
1
+ See 2 more…
cell line
EndoC_BH1
1
HepG2
1
smooth muscle cell of the coronary artery
1
See all biosamples
Download