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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
223
candidate regulatory elements
175
target gene predictions
148
accessible chromatin
145
chromatin state
93
gene expression
78
histone modifications
60
binding sites
56
eQTL
51
Fine-mapped variants
38
variant allelic effects
26
differential activity
4
caQTL
2
pQTL
Date released
351
September, 2022
249
February, 2021
59
March, 2020
53
November, 2021
45
January, 2020
43
June, 2020
40
September, 2023
36
May, 2020
34
February, 2024
32
February, 2020
30
May, 2021
27
January, 2022
18
October, 2022
14
August, 2017
12
August, 2021
11
March, 2023
7
November, 2022
5
April, 2020
5
May, 2019
4
February, 2023
4
November, 2019
4
October, 2019
3
May, 2022
3
November, 2020
January, 2021
2
March, 2024
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
Available data
734
bed bed3+
179
tsv
131
bed bed9
93
bigWig
16
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
1098
Homo sapiens
Biosample type
528
tissue
402
primary cell
113
cell line
54
in vitro differentiated cells
2
stem cell
Organ
929
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
266
vasculature
257
pancreas
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
87
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1000
AMP
53
ENCODE
35
KPMP
5
LungMap
4
ITG
2
community
Genome assembly (visualization)
939
hg19
339
GRCh38
2
hg18
month_released!
January, 2021
BIOSAMPLE
TYPE
1099 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
histone modifications
binding sites
eQTL
Fine-mapped variants
variant allelic effects
differential activity
caQTL
pQTL
tissue
brain
29
16
2
18
1
3
1
2
1
adipose tissue
7
8
2
6
3
1
4
1
caudate nucleus
5
3
2
4
1
1
2
3
1
coronary artery
3
3
3
3
1
2
3
2
1
subcutaneous adipose tissue
2
2
1
5
6
3
1
1
+ See 76 more…
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
endothelial cell of umbilical vein
6
4
2
5
2
1
osteoblast
2
2
5
1
2
2
3
endothelial cell of hepatic sinusoid
6
4
6
+ See 66 more…
cell line
SK-N-DZ
4
2
1
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 22 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
hippocampal neuron
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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