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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
168
candidate regulatory elements
162
gene expression
124
accessible chromatin
103
target gene predictions
88
chromatin state
49
binding sites
41
variant allelic effects
33
histone modifications
28
differential activity
5
eQTL
2
caQTL
Date released
246
September, 2022
242
February, 2021
79
February, 2024
39
May, 2021
36
March, 2023
32
June, 2020
23
August, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
March, 2020
7
October, 2022
6
August, 2017
6
August, 2018
5
October, 2019
4
March, 2024
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
522
bed bed3+
171
tsv
82
bed bed9
81
bigWig
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
803
Homo sapiens
Biosample type
510
primary cell
195
tissue
72
cell line
26
in vitro differentiated cells
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
803
AMP
155
KPMP
127
ENCODE
7
LungMap
2
community
Genome assembly (visualization)
607
hg19
143
GRCh38
month_released!
January, 2021
BIOSAMPLE
TYPE
803 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
binding sites
variant allelic effects
histone modifications
differential activity
eQTL
caQTL
primary cell
hepatocyte
1
13
7
2
1
1
2
4
epithelial cell of proximal tubule
2
16
1
1
1
1
1
endothelial cell
9
4
2
2
1
1
2
glomerular endothelial cell
2
14
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 86 more…
tissue
large intestine
27
1
14
13
1
sigmoid colon
10
1
7
5
pigmented layer of retina
20
transverse colon
8
1
5
4
1
breast epithelium
5
1
3
2
+ See 27 more…
cell line
EndoC_BH1
8
8
1
1
1
HT-29
2
1
2
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
+ See 13 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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