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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1356
target gene predictions
977
histone modifications
944
chromatin state
909
accessible chromatin
817
binding sites
683
gene expression
167
differential activity
140
variant allelic effects
74
Fine-mapped variants
70
eQTL
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
833
September, 2022
719
February, 2021
94
October, 2022
82
May, 2020
67
February, 2024
35
August, 2017
34
May, 2022
9
May, 2019
8
April, 2019
6
January, 2020
5
May, 2021
5
October, 2019
1
August, 2021
1
February, 2023
1
March, 2020
1
November, 2019
Available data
981
bed bed3+
869
bed bed9
40
bigBed bed9
34
bed bed9+
6
bigWig
4
bigBed narrowPeak
1
bam
Organism
1900
Homo sapiens
Biosample type
838
cell line
595
tissue
378
primary cell
88
in vitro differentiated cells
1
stem cell
Organ
137
epithelium
105
brain
100
kidney
95
connective tissue
88
musculature of body
81
lung
73
bodily fluid
70
blood
69
vasculature
68
intestine
66
heart
60
limb
54
skin of body
53
blood vessel
42
large intestine
41
embryo
36
extraembryonic component
34
liver
33
pancreas
28
mammary gland
26
stomach
23
bone element
22
prostate gland
20
lymph node
20
small intestine
19
placenta
18
artery
17
eye
17
penis
16
ureter
15
adipose tissue
15
adrenal gland
12
thymus
11
gonad
10
spinal cord
9
esophagus
9
vein
8
uterus
7
spleen
7
testis
6
nerve
5
bronchus
5
lymphoid tissue
5
thyroid gland
4
bone marrow
4
lymphatic vessel
4
mouth
4
ovary
3
skeleton
2
breast
2
tongue
2
trachea
2
urinary bladder
2
vagina
1
nose
Project
1900
AMP
1
T1D
Genome assembly (visualization)
1884
hg19
875
GRCh38
1
hg18
month_released!
January, 2022
BIOSAMPLE
TYPE
1901 results
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Clear Filters
chromatin state
binding sites
variant allelic effects
cell line
A549
18
2
K562
7
2
breast cancer cell
9
MCF-7
5
3
melanoma
7
+ See 586 more…
tissue
heart
21
1
2
brain
18
1
1
stomach
19
kidney
16
1
1
muscle of arm
16
1
+ See 131 more…
primary cell
common myeloid progenitor, CD34-positive
13
CD4-positive, alpha-beta memory T cell
9
B cell
8
endothelial cell of umbilical vein
5
2
1
mature neutrophil
7
1
+ See 164 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
1
adipocyte
6
1
embryonic stem cell
5
1
neural progenitor cell
4
T-cell acute lymphoblastic leukemia
3
+ See 48 more…
stem cell
H1-hESC
1
See all biosamples
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