Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
13
candidate regulatory elements
12
target gene predictions
8
chromatin state
7
binding sites
6
accessible chromatin
2
variant allelic effects
1
histone modifications
Date released
21
September, 2022
12
February, 2021
8
November, 2021
2
February, 2024
2
June, 2020
2
October, 2022
1
August, 2017
1
May, 2021
Available data
42
bed bed3+
7
bed bed9
4
bigWig
Organism
49
Homo sapiens
Biosample type
49
primary cell
36
cell line
21
tissue
3
in vitro differentiated cells
Organ
819
epithelium
309
kidney
280
connective tissue
169
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
mouth
4
small intestine
4
spinal cord
3
gonad
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
thymus
Project
41
AMP
8
ENCODE
Genome assembly (visualization)
49
hg19
15
GRCh38
month_released!
January, 2022
BIOSAMPLE
TYPE
49 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
variant allelic effects
histone modifications
primary cell
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
4
1
fibroblast of mammary gland
2
1
1
2
1
1
myoepithelial cell of mammary gland
4
2
2
luminal epithelial cell of mammary gland
1
3
1
2
thyroid follicular cell
1
1
1
See all biosamples
Download