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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
239
gene expression
204
accessible chromatin
122
target gene predictions
100
candidate regulatory elements
92
differential activity
53
chromatin state
43
binding sites
41
variant allelic effects
25
histone modifications
3
eQTL
2
caQTL
Date released
196
February, 2021
155
September, 2023
151
September, 2022
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
536
bed bed3+
310
tsv
168
bigWig
66
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
924
Homo sapiens
Biosample type
796
primary cell
59
tissue
43
cell line
26
in vitro differentiated cells
Organ
924
epithelium
621
kidney
447
brain
443
connective tissue
371
musculature of body
309
lung
283
intestine
265
pancreas
261
vasculature
244
heart
241
limb
214
bodily fluid
207
embryo
204
blood
199
blood vessel
199
skin of body
170
large intestine
145
extraembryonic component
145
liver
116
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
80
adipose tissue
80
uterus
76
prostate gland
72
artery
72
placenta
71
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
45
gonad
42
spinal cord
40
esophagus
32
spleen
24
nerve
23
lymphoid tissue
23
testis
22
vein
21
lymphatic vessel
21
ovary
21
thyroid gland
18
skeleton
17
mouth
16
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
1
pericardium
Project
613
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
589
hg19
231
GRCh38
month_released!
January, 2022
August, 2021
March, 2024
BIOSAMPLE
TYPE
924 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
6
14
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
1
epithelial cell of proximal tubule
15
1
1
2
1
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
glomerular endothelial cell
13
2
1
2
1
1
+ See 137 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 13 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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