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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
accessible chromatin
48
gene expression
44
target gene predictions
33
differential activity
24
candidate regulatory elements
17
chromatin state
11
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
4
eQTL
2
variant to gene
1
sQTL
Date released
47
March, 2023
44
September, 2022
33
May, 2021
31
February, 2021
25
February, 2024
20
January, 2021
18
November, 2021
9
March, 2020
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
4
January, 2020
January, 2022
4
June, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
158
bed bed3+
76
tsv
57
bigWig
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
265
Homo sapiens
Biosample type
126
primary cell
102
tissue
34
cell line
3
in vitro differentiated cells
Organ
924
epithelium
621
kidney
447
brain
443
connective tissue
371
musculature of body
309
lung
283
intestine
265
pancreas
261
vasculature
244
heart
241
limb
214
bodily fluid
207
embryo
204
blood
199
blood vessel
199
skin of body
170
large intestine
145
extraembryonic component
145
liver
116
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
80
adipose tissue
80
uterus
76
prostate gland
72
artery
72
placenta
71
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
45
gonad
42
spinal cord
40
esophagus
32
spleen
24
nerve
23
lymphoid tissue
23
testis
22
vein
21
lymphatic vessel
21
ovary
21
thyroid gland
18
skeleton
17
mouth
16
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
1
pericardium
Project
225
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
178
hg19
57
GRCh38
month_released!
January, 2022
August, 2021
March, 2024
BIOSAMPLE
TYPE
265 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
eQTL
variant to gene
sQTL
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 12 more…
tissue
islet of Langerhans
6
11
1
3
1
1
2
2
3
2
1
body of pancreas
2
5
8
4
1
3
1
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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