Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
856
candidate regulatory elements
471
target gene predictions
454
chromatin state
174
accessible chromatin
92
gene expression
47
eQTL
46
histone modifications
38
Fine-mapped variants
38
variant allelic effects
31
binding sites
5
differential activity
4
variant to gene
3
pQTL
2
caQTL
2
sQTL
1
other
Date released
1242
September, 2022
556
February, 2021
66
March, 2020
52
June, 2020
48
May, 2020
46
August, 2021
41
January, 2020
January, 2022
31
May, 2021
30
February, 2020
27
March, 2024
26
February, 2023
26
February, 2024
17
November, 2022
13
August, 2017
9
November, 2019
8
April, 2019
6
March, 2023
5
May, 2019
5
October, 2019
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
1642
bed bed3+
435
bed bed9
146
tsv
108
bigWig
25
bigBed bed9
1
bam
Organism
2263
Homo sapiens
Biosample type
2397
primary cell
2265
cell line
2264
tissue
464
in vitro differentiated cells
3
stem cell
Organ
brain
305
musculature of body
300
kidney
234
limb
229
intestine
211
heart
180
lung
132
large intestine
110
pancreas
107
stomach
97
extraembryonic component
92
connective tissue
81
adipose tissue
81
blood vessel
81
vasculature
79
small intestine
70
eye
64
ureter
61
adrenal gland
61
epithelium
59
placenta
57
liver
48
thymus
39
artery
37
gonad
35
embryo
35
spinal cord
33
spleen
32
esophagus
24
nerve
22
bone element
22
skin of body
20
ovary
19
thyroid gland
18
lymphoid tissue
18
skeleton
17
testis
14
prostate gland
12
breast
12
uterus
10
mouth
10
tongue
10
urinary bladder
9
vagina
4
bodily fluid
3
blood
2
mammary gland
2
penis
2
pituitary gland
1
vein
Project
2259
AMP
5
ITG
Genome assembly (visualization)
2151
hg19
567
GRCh38
3
hg18
month_released!
January, 2022
organ_slims!
brain
BIOSAMPLE
TYPE
2264 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
eQTL
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
caQTL
sQTL
other
tissue
heart
37
20
21
5
3
1
2
1
stomach
40
21
19
3
1
1
kidney
29
14
16
10
7
1
2
1
1
lung
33
17
16
1
muscle of arm
33
16
16
1
1
+ See 195 more…
See all biosamples
Download