Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
accessible chromatin
24
candidate regulatory elements
24
gene expression
20
target gene predictions
17
chromatin state
11
eQTL
5
Fine-mapped variants
4
binding sites
4
variant allelic effects
3
differential activity
3
histone modifications
2
sQTL
2
variant to gene
Date released
40
September, 2022
24
February, 2021
21
May, 2021
13
February, 2024
9
March, 2020
8
August, 2021
8
March, 2023
6
May, 2020
4
January, 2020
January, 2022
3
August, 2017
3
June, 2020
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
October, 2019
Available data
89
bed bed3+
29
tsv
17
bigWig
13
bed bed9
3
csv
2
bigBed bed9
Organism
147
Homo sapiens
Biosample type
primary cell
110
tissue
34
cell line
3
in vitro differentiated cells
Organ
413
brain
342
kidney
324
musculature of body
276
lung
263
intestine
241
limb
221
heart
209
bodily fluid
198
blood
193
embryo
174
connective tissue
166
large intestine
147
pancreas
130
epithelium
107
stomach
105
extraembryonic component
101
skin of body
94
vasculature
92
liver
87
blood vessel
86
eye
85
adipose tissue
79
small intestine
77
uterus
75
bone element
67
prostate gland
64
ureter
62
lymph node
62
placenta
61
adrenal gland
48
thymus
44
gonad
43
artery
41
mammary gland
38
spinal cord
33
spleen
32
esophagus
24
lymphoid tissue
24
nerve
24
testis
23
penis
20
ovary
19
thyroid gland
18
skeleton
14
mouth
12
breast
pituitary gland
10
tongue
10
urinary bladder
9
vagina
4
lymphatic vessel
4
nose
3
vein
Project
145
AMP
2
community
Genome assembly (visualization)
114
hg19
34
GRCh38
month_released!
January, 2022
organ_slims!
pituitary gland
biosample_type!
primary cell
BIOSAMPLE
TYPE
147 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
eQTL
Fine-mapped variants
binding sites
variant allelic effects
differential activity
histone modifications
sQTL
variant to gene
tissue
islet of Langerhans
6
11
1
3
10
2
2
1
1
2
2
body of pancreas
8
2
5
4
1
3
1
pancreas
5
5
5
3
1
1
1
endocrine pancreas
7
4
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
1
3
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download