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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
113
candidate regulatory elements
79
target gene predictions
74
chromatin state
50
histone modifications
43
accessible chromatin
36
Fine-mapped variants
19
gene expression
18
binding sites
17
variant allelic effects
12
eQTL
Date released
183
September, 2022
115
February, 2021
38
March, 2020
29
January, 2020
21
June, 2020
20
May, 2020
18
February, 2020
January, 2022
11
May, 2021
6
August, 2017
6
October, 2022
4
May, 2019
3
September, 2023
2
January, 2021
1
February, 2024
1
March, 2024
1
May, 2022
1
November, 2019
1
November, 2021
Available data
319
bed bed3+
67
bed bed9
67
tsv
22
bigWig
6
bigBed bed9
1
bed bed9+
Organism
460
Homo sapiens
Biosample type
332
tissue
77
cell line
48
primary cell
3
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
651
kidney
452
connective tissue
448
brain
374
musculature of body
310
lung
286
intestine
273
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
201
blood vessel
201
skin of body
172
large intestine
155
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
72
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
458
AMP
2
T1D
1
ENCODE
Genome assembly (visualization)
435
hg19
136
GRCh38
month_released!
January, 2022
BIOSAMPLE
TYPE
461 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
gene expression
binding sites
variant allelic effects
eQTL
tissue
brain
29
16
18
3
2
1
1
1
caudate nucleus
5
3
4
1
2
3
1
1
1
substantia nigra
5
2
3
1
3
1
1
cerebellum
3
2
2
1
1
3
2
1
frontal cortex
2
2
2
2
3
2
1
1
+ See 55 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 9 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
cardiac fibroblast
3
2
brain microvascular endothelial cell
2
1
1
1
+ See 9 more…
in vitro differentiated cells
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
hippocampal neuron
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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