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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
257
gene expression
220
accessible chromatin
129
target gene predictions
108
candidate regulatory elements
92
differential activity
60
chromatin state
46
binding sites
45
variant allelic effects
31
histone modifications
6
Fine-mapped variants
5
eQTL
4
caQTL
Date released
206
February, 2021
166
September, 2022
155
September, 2023
127
November, 2021
76
February, 2024
38
March, 2023
36
May, 2021
27
June, 2020
23
August, 2021
20
January, 2021
20
May, 2020
18
January, 2020
15
February, 2023
15
November, 2022
12
February, 2020
12
March, 2020
7
April, 2020
7
October, 2022
6
August, 2018
5
October, 2019
3
August, 2017
January, 2022
3
November, 2019
2
March, 2024
2
May, 2022
1
July, 2020
1
May, 2019
Available data
582
bed bed3+
335
tsv
183
bigWig
78
txt
57
bed bed9
14
bigBed narrowPeak
6
csv
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1003
Homo sapiens
Biosample type
830
primary cell
100
tissue
47
cell line
26
in vitro differentiated cells
Organ
949
epithelium
651
kidney
452
connective tissue
448
brain
374
musculature of body
310
lung
286
intestine
273
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
201
blood vessel
201
skin of body
172
large intestine
155
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
72
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
692
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
648
hg19
257
GRCh38
month_released!
January, 2022
BIOSAMPLE
TYPE
1003 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 148 more…
tissue
coronary artery
1
3
3
3
3
2
3
1
1
pigmented layer of retina
20
tibial artery
1
3
2
3
3
2
3
1
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
+ See 18 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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