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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
216
accessible chromatin
135
target gene predictions
131
candidate regulatory elements
92
differential activity
66
chromatin state
44
variant allelic effects
43
binding sites
28
histone modifications
3
eQTL
2
caQTL
Date released
214
February, 2021
190
September, 2022
155
September, 2023
127
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
26
June, 2020
23
August, 2021
20
January, 2021
18
May, 2020
17
January, 2020
15
November, 2022
12
February, 2023
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
598
bed bed3+
324
tsv
179
bigWig
78
txt
63
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1013
Homo sapiens
Biosample type
819
primary cell
125
tissue
43
cell line
26
in vitro differentiated cells
Organ
949
epithelium
651
kidney
452
connective tissue
448
brain
374
musculature of body
310
lung
286
intestine
273
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
201
blood vessel
201
skin of body
172
large intestine
155
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
72
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
702
AMP
155
KPMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
664
hg19
250
GRCh38
month_released!
January, 2022
BIOSAMPLE
TYPE
1013 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
8
3
1
1
2
1
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
1
2
+ See 146 more…
tissue
renal pelvis
2
9
19
9
1
pigmented layer of retina
20
left renal pelvis
1
2
6
2
1
right renal pelvis
1
2
6
2
1
breast epithelium
1
3
5
2
+ See 18 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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