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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
histone modifications
2
gene expression
Date released
98
September, 2022
41
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
132
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
167
Homo sapiens
Biosample type
130
tissue
31
cell line
6
primary cell
Organ
921
epithelium
645
kidney
429
connective tissue
400
brain
367
musculature of body
306
lung
278
intestine
267
pancreas
255
vasculature
246
heart
240
limb
204
embryo
195
blood vessel
193
bodily fluid
188
skin of body
183
blood
167
large intestine
141
liver
140
extraembryonic component
117
stomach
105
eye
85
adipose tissue
83
bone element
83
small intestine
82
mammary gland
80
uterus
72
adrenal gland
70
prostate gland
69
placenta
67
artery
64
ureter
59
penis
58
lymph node
48
thymus
46
gonad
42
esophagus
42
spinal cord
33
spleen
24
nerve
23
lymphoid tissue
23
testis
22
ovary
22
thyroid gland
22
vein
20
lymphatic vessel
18
mouth
18
skeleton
15
bronchus
12
breast
11
bone marrow
11
pituitary gland
10
tongue
10
urinary bladder
9
vagina
4
nose
3
trachea
1
pericardium
Project
161
AMP
6
ENCODE
Genome assembly (visualization)
165
hg19
41
GRCh38
month_released!
January, 2022
annotation_type!
histone modifications
BIOSAMPLE
TYPE
167 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
colonic mucosa
4
2
3
mucosa of rectum
4
2
3
+ See 6 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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