Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
January, 2022
March, 2024
1
March, 2020
1
October, 2022
Available data
137
bed bed3+
33
bed bed9
3
bigWig
Organism
170
Homo sapiens
Biosample type
130
tissue
34
cell line
6
primary cell
Organ
947
epithelium
649
kidney
454
connective tissue
447
brain
372
musculature of body
309
lung
283
intestine
273
pancreas
262
vasculature
252
heart
241
limb
217
bodily fluid
215
embryo
206
blood
200
blood vessel
199
skin of body
170
large intestine
155
liver
145
extraembryonic component
116
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
80
uterus
76
prostate gland
72
artery
72
placenta
71
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
45
gonad
42
spinal cord
40
esophagus
32
spleen
24
nerve
23
lymphoid tissue
23
testis
22
vein
21
lymphatic vessel
21
ovary
21
thyroid gland
18
skeleton
17
mouth
16
bronchus
13
bone marrow
11
breast
11
pituitary gland
9
tongue
9
urinary bladder
8
vagina
5
trachea
4
nose
1
pericardium
Project
164
AMP
6
ENCODE
Genome assembly (visualization)
170
hg19
41
GRCh38
month_released!
January, 2022
March, 2024
BIOSAMPLE
TYPE
170 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 4 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
Download