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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
5
binding sites
5
histone modifications
2
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
January, 2022
2
March, 2024
1
March, 2020
October, 2022
Available data
136
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
171
Homo sapiens
Biosample type
132
tissue
33
cell line
6
primary cell
Organ
943
epithelium
649
kidney
442
brain
440
connective tissue
371
musculature of body
306
lung
285
intestine
273
pancreas
259
vasculature
252
heart
242
limb
214
embryo
199
blood vessel
199
bodily fluid
197
skin of body
188
blood
171
large intestine
154
liver
144
extraembryonic component
118
stomach
107
eye
88
bone element
86
adipose tissue
84
mammary gland
83
small intestine
81
uterus
77
prostate gland
72
adrenal gland
71
artery
71
placenta
64
ureter
62
penis
60
lymph node
49
thymus
46
gonad
42
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
23
testis
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
165
AMP
6
ENCODE
Genome assembly (visualization)
169
hg19
41
GRCh38
month_released!
January, 2022
October, 2022
BIOSAMPLE
TYPE
171 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 6 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
RKO
1
1
1
1
HCT-116 cell
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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