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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
binding sites
5
histone modifications
3
gene expression
Date released
98
September, 2022
41
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
January, 2022
2
March, 2024
1
February, 2020
1
March, 2020
Available data
131
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
167
Homo sapiens
Biosample type
131
tissue
29
cell line
7
primary cell
Organ
906
epithelium
644
kidney
432
brain
423
connective tissue
367
musculature of body
301
lung
280
intestine
268
pancreas
247
heart
242
vasculature
240
limb
202
embryo
185
blood vessel
183
skin of body
172
bodily fluid
166
large intestine
162
blood
142
extraembryonic component
142
liver
118
stomach
103
eye
84
adipose tissue
83
small intestine
81
bone element
78
uterus
75
mammary gland
72
adrenal gland
69
placenta
69
prostate gland
66
artery
64
ureter
57
penis
50
lymph node
48
thymus
44
gonad
42
esophagus
40
spinal cord
32
spleen
24
lymphoid tissue
24
nerve
22
ovary
22
thyroid gland
21
testis
20
vein
19
lymphatic vessel
18
mouth
18
skeleton
14
bronchus
12
breast
12
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
9
vagina
4
nose
3
trachea
1
pericardium
Project
161
AMP
6
ENCODE
Genome assembly (visualization)
164
hg19
41
GRCh38
month_released!
January, 2022
annotation_type!
binding sites
BIOSAMPLE
TYPE
167 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 5 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
RKO
1
1
1
colon epithelial cell
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
pericardium fibroblast
1
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