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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
634
binding sites
579
histone modifications
377
target gene predictions
306
candidate regulatory elements
180
chromatin state
154
accessible chromatin
21
gene expression
10
differential activity
10
eQTL
4
variant allelic effects
Date released
574
February, 2021
5
September, 2022
Available data
579
bed bed3+
Organism
579
Homo sapiens
Biosample type
579
cell line
210
primary cell
94
in vitro differentiated cells
46
tissue
Organ
23
bodily fluid
22
blood
8
connective tissue
7
liver
6
epithelium
brain
5
embryo
5
prostate gland
5
skin of body
4
lymph node
4
vasculature
3
bone element
3
heart
3
intestine
3
large intestine
3
lung
2
blood vessel
2
kidney
2
mammary gland
1
adipose tissue
1
artery
1
eye
1
limb
1
lymphatic vessel
1
lymphoid tissue
1
musculature of body
1
pancreas
1
vein
Project
579
AMP
Genome assembly (visualization)
579
hg19
4
GRCh38
month_released!
July, 2020
organ_slims!
brain
BIOSAMPLE
TYPE
579 results
search-icon
table-tab-icon
Clear Filters
histone modifications
cell line
breast cancer cell
11
gastric cancer cell
9
Rhabdomyosarcoma
8
neuroblastoma cell
8
B-lymphoblastoid cell line
6
diffuse intrinsic pontine glioma
6
liposarcoma
6
squamous cell lung carcinoma
6
Chondroid Chordoma
5
HepG2
5
esophageal adenocarcinoma
5
hESC cell
5
melanoma cell
5
osteosarcoma
4
Ewing sarcoma
3
esophageal squamous cell carcinoma
3
glioblastoma cell
3
glioma cell
3
lymphoblast
3
lymphoblastoid cell line
3
COLO205
2
HS-SY-2 cell
2
Jurkat
2
MCF-7
2
Mantle cell lymphoma
2
RS4-11 cell
2
Rh-4 cell
2
acute myeloid leukemia
2
cardiac muscle cell
2
diffuse large B-cell lymphoma
2
epithelial ovarian cancer cell
2
esophageal carcinoma
2
fibroblast of cardiac tissue
2
glioblastoma multiforme cancer stem cell
2
hematopoietic cell
2
immortal foreskin-derived fibroblast cell line cell
2
immortal neural cell line cell
2
metastatic melanoma
2
multiple myeloma cell line
2
pancreatic cell line
2
synovial sarcoma cell
2
triple-negative breast cancer
2
umbilical cord mesenchymal stem cell line cell
2
143B
1
22Rv1
1
501A
1
5637
1
697 cell
1
769-P cell
1
76NF2V cell
1
786-O cell
1
A-1847 cell
1
A-375 cell
1
A-498 cell
1
A-673 cell
1
A549
1
AG04449 cell
1
AG04450 cell
1
AG08470 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AGS cell
1
ALL-SIL cell
1
ARH-77 cell
1
AU565 cell
1
AsPC-1 cell
1
B-lymphocyte
1
BCBL-1 cell
1
BEAS-2B cell
1
BG03
1
BGC-823 cell
1
BHY cell
1
BJ cell
1
BT-474 cell
1
BT-549 cell
1
Barrett's esophagus
1
BxPC-3 cell
1
C666-1 cell
1
CA46 cell
1
CAL-33 cell
1
CAL-51 cell
1
CCRF-CEM cell
1
CFPAC-1 cell
1
CHL-1 cell
1
CHP-134 cell
1
CHP-212 cell
1
CMK
1
COLO 679 cell
1
COLO 741 cell
1
COLO-320 cell
1
COR-L311 cell
1
CTV-1 cell
1
CaSki cell
1
Caco-2 cell
1
Caki-1 cell
1
Calu-1 cell
1
Calu-3 cell
1
Capan-1 cell
1
Capan-2 cell
1
CyT49
1
D283 Med cell
1
D341 Med cell
1
DK cell
1
DLD-1 cell
1
DMS 114 cell
1
DMS 53 cell
1
DMS 79 cell
1
DND-41 cell
1
DOHH-2 cell
1
DU 145 cell
1
Daudi
1
Detroit562
1
EBC-1
1
EJM cell
1
EOL-1 cell
1
EndoC_BH1
1
FLO-1 cell
1
FU97 cell
1
FaDu cell
1
G-401 cell
1
GM06990
1
GM10847
1
GM12864
1
GM12865
1
GM12866
1
GM12872
1
GM12873
1
GM12875
1
GM12878
1
GM12891
1
GM12892
1
GM18505
1
GM18507
1
GM18526
1
GM18951
1
GM19099
1
GM19193
1
GM19238
1
GM19239
1
GM19240
1
GM23248
1
GRANTA-519 cell
1
H1-hESC
1
H7-hESC
1
HAC cell
1
HAP-1
1
HBL-2 cell
1
HBMEC cell
1
HCC-2279 cell
1
HCC-827 cell
1
HCC-95 cell
1
HCC1599 cell
1
HCC1806 cell
1
HCC1937 cell
1
HCC1954 cell
1
HCC2157 cell
1
HCC3153 cell
1
HCC70 cell
1
HCT-116 cell
1
HCT-15 cell
1
HCT-8 cell
1
HEK293
1
HEK293-T-REx cell
1
HEL cell
1
HK-2 cell
1
HL-60
1
HNE-1 cell
1
HOS cell
1
HPAF-II cell
1
HSC-4 cell
1
HT
1
HT-1080 cell
1
HT-29
1
HeLa cell
1
Hep 3B cell
1
Hepa-RG cell
1
Hodgkins lymphoma
1
Hs 68 cell
1
HuCCT-1 cell
1
HuH-7
1
HuO9 cell
1
HuT 78 cell
1
Huh-7.5 cell
1
IM-95 cell
1
IMR-32 cell
1
IMR-90
1
J82 cell
1
JJN-3 cell
1
JVM-2 cell
1
JeKo-1
1
K562
1
KARPAS-422 cell
1
KATO III cell
1
KELLY
1
KG-1 cell
1
KMS-11 cell
1
KMS-28BM
1
KMS-28PE
1
KNS-62
1
KOPT-K1 cell
1
KYSE-140 cell
1
KYSE-150 cell
1
KYSE-510 cell
1
KYSE-70 cell
1
Kasumi-1
1
LAN-1 cell
1
LAN-6 cell
1
LHCN-M2
1
LK-2
1
LN-229 cell
1
LNCAP
1
LOX-IMVI cell
1
LP1
1
LS 180 cell
1
LoVo cell
1
Loucy cell
1
M-07e cell
1
MCF-10A cell
1
MCF10A-Er-Src cell
1
MDA-MB-231 cell
1
MDA-MB-361 cell
1
MDA-MB-436 cell
1
MDA-MB-468 cell
1
ME-1
1
MEC-1 cell
1
MEC-2 cell
1
MEL-JUSO cell
1
MG63
1
MGC-803 cell
1
MHCC97-L cell
1
MIA PaCa-2 cell
1
MKN-1 cell
1
MKN-45 cell
1
MKN-7 cell
1
ML-2 cell
1
MM.1S
1
MOLM-13 cell
1
MOLM-14 cell
1
MOLP-2
1
MOLP-8 cell
1
MOLT-16 cell
1
MOLT-4 cell
1
MRC-5 cell
1
MS1 cell
1
MSTO-211H cell
1
MUTZ-3 cell
1
MV-4-11 cell
1
Merkel cell skin cancer
1
Myoblasts
1
NALM-6 cell
1
NAMALWA cell
1
NB-1643 cell
1
NB-4 cell
1
NB-69 cell
1
NCCIT cell
1
NCI-H1048 cell
1
NCI-H1299 cell
1
NCI-H146 cell
1
NCI-H1703 cell
1
NCI-H1975 cell
1
NCI-H2009 cell
1
NCI-H2087 cell
1
NCI-H209 cell
1
NCI-H211 cell
1
NCI-H2171 cell
1
NCI-H23 cell
1
NCI-H3122 cell
1
NCI-H358 cell
1
NCI-H446 cell
1
NCI-H510A cell
1
NCI-H520 cell
1
NCI-H524 cell
1
NCI-H526 cell
1
NCI-H69 cell
1
NCI-H810 cell
1
NCI-H82 cell
1
NCI-H889 cell
1
NCI-H929 cell
1
NCI-N87 cell
1
NGP cell
1
NHBE cell
1
NHDF cell
1
NHEK
1
NICR1446 cell
1
NT2-D1 cell
1
NTERA-2 cell
1
NUT midline carcinoma
1
Normal Human Astrocytes
1
OCI-AML3
1
OCI-LY1
1
OCI-LY7
1
OCUM-1 cell
1
OE19 cell
1
OE33 cell
1
OPM-2 cell
1
OS-RC-2 cell
1
OVCA-429 cell
1
OVCAR-3 cell
1
P12-ICHIKAWA cell
1
P493-6 cell
1
PA-TU-8988T cell
1
PANC-1 cell
1
PBMC cell line
1
PC-3
1
PC-3M cell
1
PC-9
1
PEER cell
1
PEO1
1
PF-382 cell
1
Pfeiffer
1
RCH-ACV cell
1
RD cell
1
REC-1 cell
1
REH cell
1
RERF-GC-1B cell
1
RH-30 cell
1
RKO
1
RMG-I cell
1
RPMI8226
1
RT-112 cell
1
RWPE1
1
Raji cell
1
Ramos
1
Rh-18 cell
1
Rh-3 cell
1
Rh-5 cell
1
SAEC
1
SCC-4 cell
1
SEM
1
SET-2
1
SF-763 cell
1
SH-EP cell
1
SH-SY5Y cell
1
SK-BR-3 cell
1
SK-MEL-2
1
SK-MEL-28
1
SK-MEL-30
1
SK-MEL-5
1
SK-N-AS cell
1
SK-N-FI cell
1
SK-N-SH_RA
1
SK-UT-1 cell
1
SKMC
1
SMMC-7721 cell
1
SNU-16 cell
1
SNU-398 cell
1
SNU-638 cell
1
SNU-719
1
SU-DHL-4
1
SUDHL10
1
SUDHL6
1
SUIT-2
1
SUM-149PT cell
1
SUM-159PT cell
1
SW 48 cell
1
SW 620 cell
1
SW 837 cell
1
SW480
1
Saos-2 cell
1
SiHa cell
1
T cell
1
T-47D cell
1
T24 cell
1
T98G cell
1
TC-32 cell
1
TC-71 cell
1
THP-1 cell
1
TIG-1 cell
1
TOV-21G cell
1
TT cell
1
Toledo
1
Tumor-derived cell line
1
U-251 MG cell
1
U-266 cell
1
U2OS
1
U937
1
UACC-257
1
UACC-812 cell
1
UKE-1 cell
1
VA-ES-BJ cell
1
VCaP cell
1
WERI-Rb-1
1
WI-38 cell
1
WSU-DLCL2 cell
1
Xenograft
1
Z-138
1
ZR-75-1 cell
1
ZR-75-30 cell
1
adenoid cystic carcinoma
1
adipocyte cell line
1
adipose tissue derived mesenchymal stem cell
1
adult T-cell lymphoma cell
1
bladder carcinoma
1
bronchial epithelial cell
1
cardiac myocyte cell derived cell line
1
cervical cancer cell line
1
chondrocyte
1
chronic lymphocytic leukemia
1
cirrhosis of liver
1
colon cancer cell line
1
colorectal cancer cell line
1
coronary artery smooth muscle cell
1
crypt
1
dermal fibroblast
1
dermis lymphatic vessel endothelial cell
1
embryonic stem cell
1
embryonic stem cell line
1
endodermal cell
1
endometrial cancer cell line
1
epithelial cell of prostate
1
esophageal epithelial cell
1
fibroblast
1
fibroblast cell line
1
gastric adenocarcinoma
1
gastroesophageal junction
1
gastrointestinal stromal tumor cell
1
glial cell
1
glioblastoma multiforme
1
hES BG01V cell
1
hESC H9
1
hTERT-HME1 cell
1
hTERT-RPE1 cell
1
helper T-lymphocyte
1
hepatic stellate cell
1
hepatoma cell line
1
human aortic endothelial cell
1
human ovarian cancer cell line cell
1
immortal endothelial cell line cell
1
immortal epidermal cell line cell
1
immortal fibroblast cell line cell
1
keratinocyte
1
leukemic stem cell
1
lung adenocarcinoma cell
1
lung carcinoid tumor
1
lung fibroblast
1
lung fibroblast cell line
1
lymphocyte
1
lymphoma cell
1
macrophage
1
malignant rhabdoid tumour
1
mesenchymal stem cell line cell
1
myxoid liposarcoma
1
nasopharyngeal carcinoma cell line
1
neural crest cell
1
neural stem cell
1
neurofibromatosis
1
non-small cell lung cancer cell
1
oral epithelial cell
1
pancreatic acinar cell
1
pancreatic adenosquamous carcinoma
1
progenitor cell of endocrine pancreas
1
prostate cancer cell line
1
prostate carcinoma
1
prostate derived cell line
1
renal cancer cell line
1
renal cell carcinoma
1
renal proximal tubule epithelial cell
1
retinoblastoma cell
1
sarcoma cell line
1
skin fibroblast
1
small cell lung cancer cell
1
small cell lung carcinoma
1
smooth muscle cell of the coronary artery
1
spinal cord
1
tongue squamous cell carcinoma
1
urinary bladder cancer cell
1
urothelium cell line
1
vein endothelial cell
1
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