Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
61
target gene predictions
52
candidate regulatory elements
45
binding sites
30
chromatin state
25
histone modifications
14
accessible chromatin
2
eQTL
2
gene expression
Date released
84
September, 2022
75
February, 2021
29
February, 2024
19
October, 2022
14
June, 2020
4
May, 2021
2
August, 2017
2
August, 2021
2
March, 2024
Available data
199
bed bed3+
28
bed bed9
2
tsv
Organism
231
Homo sapiens
Biosample type
201
cell line
21
tissue
9
primary cell
Organ
948
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
231
AMP
Genome assembly (visualization)
229
hg19
57
GRCh38
month_released!
July, 2020
assembly!
hg18
BIOSAMPLE
TYPE
231 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
cell line
K562
23
7
2
7
1
1
GM12878
8
2
2
2
1
1
GM06990
1
2
2
1
1
1
GM19240
2
1
2
1
1
1
HAP-1
2
2
1
1
1
1
+ See 24 more…
tissue
Peyer's patch
3
7
3
1
germinal center
1
1
1
blood
2
small intestine - terminal Ileum
1
whole blood
1
primary cell
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
See all biosamples
Download