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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
101
accessible chromatin
82
gene expression
74
candidate regulatory elements
69
target gene predictions
51
differential activity
50
chromatin state
26
variant allelic effects
25
binding sites
21
eQTL
14
histone modifications
3
caQTL
2
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
119
September, 2022
80
February, 2021
51
March, 2023
42
February, 2024
36
May, 2021
35
September, 2023
24
November, 2021
March, 2020
21
May, 2020
20
January, 2020
20
January, 2021
10
June, 2020
9
August, 2021
8
October, 2019
7
August, 2018
7
February, 2020
7
January, 2022
5
February, 2023
5
November, 2019
4
August, 2017
4
October, 2022
3
April, 2020
1
April, 2019
1
January, 2018
1
June, 2021
1
March, 2024
1
May, 2019
Available data
315
bed bed3+
126
tsv
88
bigWig
45
bed bed9
14
bigBed narrowPeak
10
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
txt
Organism
522
Homo sapiens
Biosample type
294
primary cell
179
tissue
44
cell line
5
in vitro differentiated cells
Organ
942
epithelium
649
kidney
451
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
145
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
438
AMP
35
KPMP
24
ENCODE
20
T1D
3
LungMap
2
community
Genome assembly (visualization)
371
hg19
136
GRCh38
month_released!
July, 2020
March, 2020
BIOSAMPLE
TYPE
522 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
differential activity
chromatin state
variant allelic effects
binding sites
eQTL
histone modifications
caQTL
Fine-mapped variants
sQTL
variant to gene
primary cell
endothelial cell of umbilical vein
2
6
3
5
1
2
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 44 more…
tissue
islet of Langerhans
6
9
1
3
1
1
13
1
2
2
2
body of pancreas
2
8
5
4
1
1
pancreas
5
5
3
3
1
1
1
1
coronary artery
3
1
3
3
3
2
2
1
tibial artery
3
1
3
2
3
2
2
+ See 15 more…
cell line
EndoC_BH1
8
8
3
1
Panc1
2
2
1
smooth muscle cell of the coronary artery
1
1
1
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 5 more…
in vitro differentiated cells
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
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