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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
217
accessible chromatin
157
candidate regulatory elements
157
target gene predictions
46
binding sites
38
variant allelic effects
33
histone modifications
3
chromatin state
2
caQTL
2
eQTL
Date released
167
September, 2022
143
February, 2021
129
November, 2021
58
February, 2024
30
June, 2020
20
January, 2021
20
May, 2021
15
November, 2022
12
January, 2020
12
May, 2020
11
August, 2021
11
February, 2023
7
April, 2020
7
October, 2022
5
October, 2019
3
August, 2017
2
March, 2020
2
May, 2022
1
November, 2019
Available data
655
bed bed3+
323
tsv
178
bigWig
82
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
655
Homo sapiens
Biosample type
473
primary cell
128
tissue
33
cell line
21
in vitro differentiated cells
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
499
AMP
129
ENCODE
20
T1D
7
LungMap
Genome assembly (visualization)
654
hg19
177
GRCh38
month_released!
July, 2020
BIOSAMPLE
TYPE
655 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
binding sites
variant allelic effects
histone modifications
chromatin state
caQTL
eQTL
primary cell
endothelial cell
15
7
2
2
1
2
1
hepatocyte
8
1
3
1
2
4
endothelial cell of umbilical vein
2
6
4
2
1
foreskin keratinocyte
11
4
keratinocyte
2
3
5
1
1
2
1
+ See 101 more…
tissue
placenta
1
26
15
1
2
pigmented layer of retina
20
chorionic villus
8
4
breast epithelium
1
5
3
esophagus squamous epithelium
1
6
2
+ See 18 more…
cell line
EndoC_BH1
8
1
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
HTR-8/Svneo
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
trophoblast cell
2
2
foreskin keratinocyte
1
1
1
hepatocyte
2
1
mammary gland epithelial cell
1
1
1
+ See 1 more…
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