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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1338
target gene predictions
976
histone modifications
817
binding sites
783
accessible chromatin
61
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2409
February, 2021
1678
September, 2022
333
November, 2021
293
February, 2024
288
June, 2020
285
May, 2021
May, 2020
101
October, 2022
January, 2020
56
January, 2021
52
August, 2021
45
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
June, 2021
Available data
5721
bed bed3+
883
tsv
860
bed bed9
427
bigWig
108
txt
34
bed bed9+
31
bigBed bed9
24
csv
15
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5720
Homo sapiens
Biosample type
2122
cell line
1764
tissue
1492
primary cell
337
in vitro differentiated cells
4
stem cell
Organ
523
epithelium
311
connective tissue
281
kidney
279
brain
271
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
165
skin of body
161
limb
154
heart
149
pancreas
141
vasculature
137
large intestine
112
extraembryonic component
110
blood vessel
97
liver
94
eye
93
stomach
76
uterus
73
mammary gland
69
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
45
ureter
43
adipose tissue
40
artery
37
gonad
37
thymus
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
16
vein
15
skeleton
14
bronchus
14
lymphatic vessel
13
mouth
11
nerve
11
pituitary gland
10
bone marrow
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5308
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5713
hg19
730
GRCh38
1
hg18
month_released!
June, 2021
January, 2020
May, 2020
BIOSAMPLE
TYPE
5721 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 759 more…
tissue
stomach
40
21
1
3
heart
37
20
1
1
3
kidney
29
14
2
1
8
1
brain
29
16
3
1
1
lung
33
17
+ See 211 more…
primary cell
monocyte
1
86
1
16
1
1
CD8-positive, alpha-beta T cell
7
4
30
2
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
2
15
2
2
1
B cell
14
9
4
+ See 309 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 101 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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