Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
429
accessible chromatin
357
target gene predictions
311
candidate regulatory elements
242
gene expression
210
histone modifications
188
chromatin state
96
differential activity
93
binding sites
41
eQTL
19
variant allelic effects
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
460
September, 2022
363
February, 2021
330
November, 2021
256
May, 2021
February, 2024
141
September, 2023
80
May, 2020
56
January, 2021
55
March, 2023
48
June, 2020
40
May, 2022
37
January, 2022
30
October, 2022
22
August, 2021
19
April, 2020
16
January, 2020
9
August, 2018
9
February, 2020
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
2
May, 2024
1
July, 2020
June, 2021
1
March, 2024
Available data
1439
bed bed3+
366
bigWig
318
tsv
155
bed bed9
27
bed bed9+
21
txt
4
bigBed bed9
4
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
1964
Homo sapiens
Biosample type
2326
tissue
2143
cell line
2009
primary cell
437
in vitro differentiated cells
4
stem cell
Organ
759
epithelium
kidney
269
connective tissue
153
vasculature
113
pancreas
100
blood vessel
99
skin of body
45
mammary gland
41
penis
40
extraembryonic component
38
liver
36
musculature of body
35
brain
33
lung
31
heart
29
artery
23
eye
22
embryo
20
intestine
20
vein
17
lymphatic vessel
15
bronchus
14
bone element
13
bone marrow
10
adrenal gland
10
placenta
9
blood
9
bodily fluid
9
prostate gland
9
stomach
8
esophagus
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
2
ovary
2
thyroid gland
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1459
AMP
330
ENCODE
141
KPMP
58
T1D
19
LungMap
2
community
Genome assembly (visualization)
1624
hg19
657
GRCh38
month_released!
June, 2021
February, 2024
organ_slims!
kidney
BIOSAMPLE
TYPE
2009 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
histone modifications
chromatin state
differential activity
binding sites
eQTL
variant allelic effects
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
2
15
86
1
4
2
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
5
7
3
30
1
B cell
6
10
13
2
8
endothelial cell
14
7
8
1
2
2
+ See 371 more…
See all biosamples
Download