Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
937
candidate regulatory elements
chromatin state
489
target gene predictions
197
accessible chromatin
115
eQTL
108
gene expression
89
histone modifications
48
variant allelic effects
35
binding sites
5
differential activity
4
variant to gene
3
pQTL
2
Fine-mapped variants
2
caQTL
2
sQTL
1
other
Date released
918
September, 2022
641
February, 2021
March, 2020
63
June, 2020
58
January, 2020
57
May, 2020
56
January, 2022
48
February, 2020
46
August, 2021
31
May, 2021
28
March, 2024
26
February, 2023
21
February, 2024
17
November, 2022
9
November, 2019
6
March, 2023
3
September, 2018
2
January, 2018
2
May, 2022
2
October, 2019
1
August, 2020
1
August, 2022
Available data
1796
bed bed3+
138
tsv
118
bigWig
Organism
2035
Homo sapiens
Biosample type
2269
primary cell
2154
cell line
2037
tissue
416
in vitro differentiated cells
1
stem cell
Organ
254
brain
240
kidney
229
musculature of body
178
limb
175
intestine
151
heart
137
lung
101
large intestine
92
pancreas
83
stomach
78
connective tissue
75
extraembryonic component
67
adipose tissue
65
eye
59
small intestine
57
blood vessel
57
epithelium
57
vasculature
51
ureter
47
adrenal gland
46
placenta
43
liver
36
thymus
31
gonad
30
artery
28
esophagus
27
embryo
27
spleen
26
spinal cord
22
skin of body
19
bone element
18
nerve
16
ovary
16
thyroid gland
15
skeleton
15
testis
14
lymphoid tissue
13
prostate gland
12
uterus
11
breast
9
mouth
8
tongue
8
vagina
7
urinary bladder
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
2032
AMP
5
ITG
Genome assembly (visualization)
1845
hg19
171
GRCh38
3
hg18
month_released!
March, 2020
annotation_type!
chromatin state
BIOSAMPLE
TYPE
2037 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
eQTL
gene expression
histone modifications
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
Fine-mapped variants
caQTL
sQTL
other
tissue
heart
37
19
5
3
1
2
1
stomach
40
21
3
1
1
1
kidney
29
14
10
1
7
2
1
1
brain
29
16
2
2
1
3
1
1
lung
33
16
1
1
+ See 258 more…
See all biosamples
Download