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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1174
target gene predictions
905
chromatin state
873
accessible chromatin
863
histone modifications
816
binding sites
582
gene expression
168
eQTL
167
differential activity
140
variant allelic effects
12
caQTL
4
variant to gene
3
pQTL
2
Fine-mapped variants
2
other
2
sQTL
1
representative DNase hypersensitivity sites
Date released
289
June, 2020
222
November, 2021
65
January, 2020
54
May, 2020
49
February, 2024
44
November, 2022
30
August, 2021
28
January, 2021
May, 2021
25
February, 2023
19
April, 2020
May, 2022
12
November, 2019
11
February, 2021
9
October, 2019
6
September, 2022
4
January, 2022
3
September, 2018
2
November, 2020
1
June, 2021
Available data
863
bed bed3+
508
bigWig
9
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
Organism
828
Homo sapiens
Biosample type
458
primary cell
195
tissue
156
cell line
64
in vitro differentiated cells
Organ
203
epithelium
85
connective tissue
59
eye
57
pancreas
50
kidney
42
brain
36
vasculature
26
blood vessel
26
heart
24
musculature of body
23
liver
21
intestine
20
limb
15
bone element
15
lung
13
skin of body
12
blood
12
bodily fluid
12
embryo
11
artery
10
large intestine
9
extraembryonic component
8
lymph node
8
skeleton
8
stomach
7
adipose tissue
7
adrenal gland
7
mammary gland
5
gonad
5
prostate gland
4
esophagus
4
lymphatic vessel
4
placenta
4
ureter
3
bronchus
3
nerve
3
penis
3
small intestine
3
uterus
2
bone marrow
2
lymphoid tissue
2
ovary
2
spinal cord
2
spleen
2
testis
2
thymus
2
thyroid gland
2
vein
1
breast
1
mouth
1
nose
1
tongue
1
trachea
1
urinary bladder
Project
603
AMP
222
ENCODE
29
T1D
19
LungMap
Genome assembly (visualization)
865
hg19
373
GRCh38
month_released!
March, 2020
May, 2021
May, 2022
BIOSAMPLE
TYPE
873 results
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Clear Filters
accessible chromatin
primary cell
fibroblast
14
endothelial cell
13
excitatory neuron
12
macrophage
11
pericyte cell
10
+ See 217 more…
tissue
retina
23
pigmented layer of retina
20
kidney
10
heart
5
islet of Langerhans
5
+ See 95 more…
cell line
HepG2
2
Rh-4 cell
2
fibroblast of cardiac tissue
2
786-O cell
1
A-673 cell
1
+ See 148 more…
in vitro differentiated cells
neural progenitor cell
10
retinal pigment epithelial cell
6
SGBS preadipocytes
5
chondrocyte
5
adipocyte
4
+ See 30 more…
See all biosamples
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