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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1174
target gene predictions
877
accessible chromatin
862
histone modifications
816
binding sites
124
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
2
pQTL
2
variant to gene
1
other
1
sQTL
Date released
2409
February, 2021
1678
September, 2022
333
November, 2021
293
February, 2024
288
June, 2020
May, 2021
135
May, 2020
101
October, 2022
66
January, 2020
56
January, 2021
52
August, 2021
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5593
bed bed3+
864
bed bed9
731
tsv
533
bigWig
108
txt
35
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5547
Homo sapiens
Biosample type
2066
cell line
1791
tissue
1415
primary cell
317
in vitro differentiated cells
2
stem cell
Organ
528
epithelium
314
connective tissue
309
kidney
296
brain
272
musculature of body
234
lung
220
intestine
186
bodily fluid
177
blood
172
embryo
172
limb
164
heart
160
skin of body
157
vasculature
140
pancreas
131
large intestine
117
blood vessel
109
extraembryonic component
98
eye
95
liver
90
stomach
74
uterus
71
mammary gland
70
bone element
62
small intestine
61
prostate gland
55
placenta
54
adrenal gland
53
lymph node
53
penis
51
ureter
44
adipose tissue
44
artery
36
thymus
35
gonad
32
esophagus
28
spinal cord
24
spleen
19
testis
18
lymphoid tissue
16
thyroid gland
15
ovary
15
skeleton
15
vein
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
8
breast
7
tongue
6
urinary bladder
6
vagina
5
trachea
3
nose
1
pituitary gland
Project
5180
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5585
hg19
703
GRCh38
1
hg18
month_released!
March, 2020
May, 2021
BIOSAMPLE
TYPE
5593 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
pQTL
variant to gene
other
sQTL
cell line
HeLa-S3
5
54
1
A549
21
18
1
1
2
H1-hESC
1
38
1
1
2
K562
7
22
1
1
2
1
MCF-7
9
5
1
2
3
+ See 757 more…
tissue
heart
37
19
5
1
1
2
stomach
40
19
3
1
kidney
29
14
10
2
1
1
1
brain
29
16
2
3
1
1
muscle of arm
33
16
1
1
+ See 211 more…
primary cell
common myeloid progenitor, CD34-positive
27
13
endothelial cell
7
15
1
2
2
2
1
B cell
14
9
6
fibroblast
4
16
1
6
CD4-positive, alpha-beta memory T cell
14
9
+ See 325 more…
in vitro differentiated cells
neural progenitor cell
5
4
10
14
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
2
4
1
1
4
T-cell acute lymphoblastic leukemia
5
3
mesenchymal stem cell
3
2
1
1
1
+ See 100 more…
stem cell
H1-hESC
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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