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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
38
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
March, 2020
1
October, 2022
Available data
131
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
168
Homo sapiens
Biosample type
130
tissue
32
cell line
6
primary cell
Organ
909
epithelium
649
kidney
433
connective tissue
417
brain
360
musculature of body
306
lung
281
intestine
251
vasculature
236
heart
235
pancreas
232
limb
214
bodily fluid
207
embryo
203
blood
199
skin of body
189
blood vessel
168
large intestine
143
extraembryonic component
143
liver
116
stomach
109
eye
89
bone element
85
mammary gland
82
small intestine
81
uterus
78
adipose tissue
76
prostate gland
72
placenta
70
adrenal gland
67
artery
64
ureter
63
penis
61
lymph node
48
gonad
47
thymus
44
esophagus
39
spinal cord
32
spleen
26
testis
24
lymphoid tissue
22
nerve
22
thyroid gland
21
lymphatic vessel
21
ovary
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
162
AMP
6
ENCODE
Genome assembly (visualization)
164
hg19
43
GRCh38
month_released!
March, 2020
May, 2021
BIOSAMPLE
TYPE
168 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
13
13
1
1
sigmoid colon
10
5
5
1
transverse colon
8
4
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 7 more…
cell line
HT-29
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
RKO
1
1
1
1
HCT-116 cell
1
2
+ See 3 more…
primary cell
colon epithelial cell
3
3
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