Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
59
accessible chromatin
46
gene expression
41
target gene predictions
33
differential activity
24
candidate regulatory elements
17
chromatin state
15
eQTL
11
variant allelic effects
6
histone modifications
4
binding sites
2
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
47
March, 2023
44
September, 2022
33
May, 2021
31
February, 2021
25
February, 2024
20
January, 2021
18
November, 2021
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
149
bed bed3+
71
tsv
51
bigWig
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
262
Homo sapiens
Biosample type
121
primary cell
105
tissue
33
cell line
3
in vitro differentiated cells
Organ
938
epithelium
649
kidney
447
connective tissue
428
brain
365
musculature of body
310
lung
287
intestine
262
pancreas
252
vasculature
238
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
190
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
89
bone element
87
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
48
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
222
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
173
hg19
52
GRCh38
month_released!
March, 2020
October, 2019
BIOSAMPLE
TYPE
262 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
5
3
3
3
1
2
1
pancreatic alpha cell
6
3
3
3
1
pancreatic beta cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
pancreatic acinar cell
5
3
3
3
1
+ See 12 more…
tissue
islet of Langerhans
6
9
1
3
13
1
1
1
2
2
2
body of pancreas
2
5
8
4
1
1
pancreas
4
3
5
3
1
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download