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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
907
accessible chromatin
839
candidate regulatory elements
816
binding sites
672
gene expression
479
target gene predictions
171
eQTL
167
differential activity
140
variant allelic effects
111
chromatin state
13
caQTL
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
3
variant to gene
2
Fine-mapped variants
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
128
August, 2021
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4199
bed bed3+
821
tsv
542
bigWig
108
txt
40
bigBed bed9
36
bed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
Organism
5263
Homo sapiens
Biosample type
1979
primary cell
1803
cell line
1170
tissue
355
in vitro differentiated cells
2
stem cell
Organ
792
epithelium
424
kidney
331
connective tissue
248
brain
224
pancreas
179
vasculature
162
musculature of body
143
bodily fluid
138
blood
133
embryo
132
blood vessel
132
heart
123
intestine
102
skin of body
100
liver
100
lung
97
limb
82
eye
75
large intestine
71
uterus
57
adipose tissue
49
stomach
48
artery
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
30
adrenal gland
26
small intestine
25
gonad
25
placenta
25
ureter
23
esophagus
16
spinal cord
16
vein
15
lymphatic vessel
15
spleen
15
thymus
14
testis
13
nerve
13
pituitary gland
11
thyroid gland
10
bone marrow
10
bronchus
10
ovary
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
vagina
3
urinary bladder
1
nose
1
pericardium
Project
4602
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
4335
hg19
960
GRCh38
4
hg18
month_released!
March, 2020
September, 2022
August, 2020
BIOSAMPLE
TYPE
5311 results
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Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
eQTL
differential activity
variant allelic effects
chromatin state
caQTL
hQTL
sQTL
meQTL
other
pQTL
variant to gene
Fine-mapped variants
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
15
2
9
7
1
2
2
fibroblast
16
1
4
2
6
macrophage
12
2
3
7
3
1
+ See 441 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
K562
1
1
1
2
17
1
EndoC_BH1
1
8
1
8
3
1
breast cancer cell
11
9
+ See 743 more…
tissue
islet of Langerhans
1
5
1
9
1
13
1
3
2
2
2
kidney
2
10
15
1
7
1
1
2
heart
1
5
18
1
3
2
2
retina
1
23
3
1
1
1
1
stomach
1
3
21
1
2
1
+ See 255 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
adipocyte
1
4
2
1
1
4
4
embryonic stem cell
1
6
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 118 more…
stem cell
H1-hESC
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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