Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
59
candidate regulatory elements
35
target gene predictions
32
chromatin state
6
accessible chromatin
2
eQTL
2
gene expression
2
histone modifications
1
binding sites
Date released
86
September, 2022
33
February, 2021
6
November, 2021
3
August, 2017
3
June, 2020
3
May, 2021
2
January, 2022
2
March, 2024
1
February, 2024
March, 2020
Available data
106
bed bed3+
29
bed bed9
3
bigWig
2
tsv
Organism
139
Homo sapiens
Biosample type
133
tissue
cell line
6
primary cell
Organ
901
epithelium
611
kidney
418
connective tissue
351
brain
349
musculature of body
253
intestine
243
vasculature
235
pancreas
231
heart
228
limb
214
lung
186
blood vessel
143
extraembryonic component
139
large intestine
134
skin of body
119
liver
118
stomach
99
eye
87
embryo
83
small intestine
78
adipose tissue
72
adrenal gland
70
placenta
65
artery
64
ureter
51
mammary gland
49
penis
48
thymus
44
esophagus
42
gonad
37
spinal cord
36
bone element
33
spleen
25
prostate gland
23
thyroid gland
22
nerve
22
ovary
20
vein
19
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
133
AMP
6
ENCODE
Genome assembly (visualization)
135
hg19
37
GRCh38
month_released!
March, 2020
biosample_type!
cell line
BIOSAMPLE
TYPE
139 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
histone modifications
binding sites
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
6
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 7 more…
primary cell
colon epithelial cell
3
3
See all biosamples
Download