Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
56
candidate regulatory elements
32
target gene predictions
29
chromatin state
11
binding sites
10
histone modifications
7
accessible chromatin
2
eQTL
1
gene expression
1
variant allelic effects
Date released
87
September, 2022
47
February, 2021
7
June, 2020
3
May, 2021
2
January, 2022
November, 2021
1
February, 2024
1
March, 2024
1
October, 2022
Available data
117
bed bed3+
29
bed bed9
1
tsv
Organism
149
Homo sapiens
Biosample type
75
tissue
56
cell line
18
primary cell
Organ
816
epithelium
646
kidney
428
brain
401
connective tissue
355
musculature of body
301
lung
268
intestine
250
pancreas
248
vasculature
235
limb
230
heart
218
bodily fluid
212
embryo
207
blood
194
skin of body
189
blood vessel
167
large intestine
143
extraembryonic component
141
liver
109
stomach
105
eye
88
bone element
81
adipose tissue
81
mammary gland
81
uterus
79
small intestine
78
prostate gland
71
placenta
69
artery
64
penis
64
ureter
62
adrenal gland
62
lymph node
47
gonad
47
thymus
40
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
22
nerve
22
vein
21
thyroid gland
20
ovary
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
149
AMP
Genome assembly (visualization)
146
hg19
31
GRCh38
month_released!
March, 2020
November, 2021
BIOSAMPLE
TYPE
149 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
variant allelic effects
tissue
placenta
26
15
14
1
2
1
1
prostate gland
4
2
2
2
2
1
1
prostate
1
cell line
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
LNCAP
2
1
1
1
1
+ See 6 more…
primary cell
epithelial cell of prostate
4
3
2
fibroblast of villous mesenchyme
2
1
1
2
1
1
luminal epithelial cell of prostatic duct
1
See all biosamples
Download