Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
484
accessible chromatin
465
gene expression
372
target gene predictions
328
candidate regulatory elements
210
histone modifications
197
chromatin state
110
differential activity
100
binding sites
81
variant allelic effects
44
eQTL
11
caQTL
hQTL
3
meQTL
3
sQTL
1
other
Date released
487
September, 2022
456
February, 2021
333
November, 2021
281
September, 2023
251
May, 2021
152
February, 2024
86
May, 2020
56
January, 2021
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
37
January, 2022
31
October, 2022
23
January, 2020
19
April, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
1592
bed bed3+
534
tsv
410
bigWig
164
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
2364
Homo sapiens
Biosample type
2646
tissue
2409
primary cell
2343
cell line
470
in vitro differentiated cells
4
stem cell
Organ
783
epithelium
309
kidney
274
connective tissue
165
vasculature
110
blood vessel
100
skin of body
87
pancreas
59
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
1717
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
Genome assembly (visualization)
1798
hg19
707
GRCh38
month_released!
March, 2023
annotation_type!
hQTL
BIOSAMPLE
TYPE
2409 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
meQTL
sQTL
other
primary cell
monocyte
18
15
2
86
1
4
1
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
4
3
5
7
30
1
B cell
6
2
10
14
8
endothelial cell
15
9
7
1
2
2
1
2
+ See 441 more…
See all biosamples
Download