Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
accessible chromatin
44
target gene predictions
39
gene expression
24
candidate regulatory elements
17
chromatin state
11
variant allelic effects
10
eQTL
6
histone modifications
5
binding sites
3
Fine-mapped variants
1
differential activity
1
sQTL
Date released
March, 2023
44
September, 2022
33
May, 2021
31
February, 2021
25
February, 2024
20
January, 2021
18
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
4
January, 2020
January, 2022
4
June, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
159
bed bed3+
57
bigWig
35
tsv
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
226
Homo sapiens
Biosample type
104
tissue
87
primary cell
32
cell line
3
in vitro differentiated cells
Organ
911
epithelium
651
kidney
448
brain
445
connective tissue
374
musculature of body
310
lung
286
intestine
259
vasculature
252
heart
242
limb
226
pancreas
218
bodily fluid
215
embryo
207
blood
201
skin of body
197
blood vessel
172
large intestine
151
liver
145
extraembryonic component
118
stomach
109
eye
89
bone element
87
mammary gland
86
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
artery
72
placenta
64
penis
64
ureter
62
lymph node
49
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
nerve
24
testis
23
vein
22
ovary
22
thyroid gland
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
188
AMP
20
T1D
18
ENCODE
Genome assembly (visualization)
186
hg19
57
GRCh38
month_released!
March, 2023
January, 2022
BIOSAMPLE
TYPE
226 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
chromatin state
variant allelic effects
eQTL
histone modifications
binding sites
Fine-mapped variants
differential activity
sQTL
tissue
islet of Langerhans
6
1
11
3
1
9
1
2
1
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 6 more…
primary cell
pancreatic ductal cell
6
3
2
1
2
1
pancreatic beta cell
8
3
2
1
pancreatic alpha cell
7
3
2
1
pancreatic acinar cell
6
3
2
1
pancreatic delta cell
5
4
2
1
+ See 8 more…
cell line
EndoC_BH1
8
1
8
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download