Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1233
candidate regulatory elements
904
target gene predictions
689
chromatin state
679
binding sites
673
histone modifications
356
accessible chromatin
131
gene expression
124
eQTL
72
Fine-mapped variants
49
variant allelic effects
6
differential activity
3
pQTL
2
caQTL
2
variant to gene
1
other
1
sQTL
Date released
1927
February, 2021
1880
September, 2022
214
June, 2020
194
February, 2024
111
March, 2020
94
May, 2021
70
October, 2022
66
January, 2022
60
January, 2020
59
May, 2020
55
August, 2021
48
February, 2020
29
March, 2024
27
February, 2023
24
August, 2017
17
November, 2022
March, 2023
11
November, 2019
9
May, 2019
9
May, 2022
8
April, 2019
5
October, 2019
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
Available data
3924
bed bed3+
652
bed bed9
232
tsv
121
bigWig
31
bigBed bed9
7
bed bed9+
1
bam
Organism
4923
Homo sapiens
Biosample type
2582
tissue
2416
primary cell
2343
cell line
470
in vitro differentiated cells
4
stem cell
Organ
426
brain
342
kidney
323
musculature of body
277
lung
266
intestine
243
limb
223
heart
209
bodily fluid
198
blood
168
large intestine
162
embryo
140
pancreas
126
connective tissue
108
stomach
102
epithelium
101
extraembryonic component
95
skin of body
95
vasculature
90
blood vessel
87
adipose tissue
86
liver
80
eye
80
small intestine
78
uterus
75
bone element
68
prostate gland
ureter
63
placenta
62
adrenal gland
62
lymph node
48
thymus
46
artery
46
gonad
39
spinal cord
38
mammary gland
35
esophagus
34
spleen
25
nerve
25
testis
24
lymphoid tissue
21
ovary
20
thyroid gland
18
skeleton
17
penis
15
mouth
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
3
vein
2
lymphatic vessel
Project
4920
AMP
5
ITG
Genome assembly (visualization)
4704
hg19
1083
GRCh38
4
hg18
month_released!
March, 2023
organ_slims!
ureter
BIOSAMPLE
TYPE
4925 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
gene expression
eQTL
Fine-mapped variants
variant allelic effects
differential activity
pQTL
caQTL
variant to gene
other
sQTL
tissue
heart
37
20
21
1
1
5
3
2
stomach
40
21
19
1
3
1
1
kidney
29
14
16
1
2
10
7
1
1
brain
29
16
18
1
3
2
1
2
1
lung
33
17
16
1
1
+ See 258 more…
cell line
HeLa-S3
5
55
3
1
A549
21
19
18
2
1
1
H1-hESC
1
39
1
2
1
1
8
K562
7
23
7
2
1
1
MCF-7
9
6
5
3
2
1
+ See 765 more…
See all biosamples
Download