Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
accessible chromatin
47
target gene predictions
42
gene expression
28
candidate regulatory elements
19
chromatin state
14
eQTL
11
variant allelic effects
7
binding sites
7
histone modifications
3
Fine-mapped variants
3
differential activity
1
sQTL
Date released
50
September, 2022
March, 2023
36
February, 2021
33
May, 2021
25
February, 2024
21
November, 2021
20
January, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
June, 2020
5
September, 2023
4
January, 2020
4
January, 2022
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
April, 2020
1
February, 2023
1
January, 2018
1
June, 2021
Available data
173
bed bed3+
60
bigWig
40
tsv
15
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
251
Homo sapiens
Biosample type
108
tissue
104
primary cell
34
cell line
5
in vitro differentiated cells
Organ
911
epithelium
652
kidney
466
brain
451
connective tissue
375
musculature of body
311
lung
289
intestine
262
vasculature
255
heart
244
limb
230
pancreas
218
bodily fluid
215
embryo
207
blood
204
skin of body
200
blood vessel
174
large intestine
152
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
204
AMP
21
ENCODE
20
T1D
5
KPMP
1
LungMap
Genome assembly (visualization)
202
hg19
66
GRCh38
month_released!
March, 2023
BIOSAMPLE
TYPE
251 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
differential activity
sQTL
tissue
islet of Langerhans
6
1
11
3
12
1
2
1
1
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 6 more…
primary cell
pancreatic ductal cell
6
3
2
1
1
2
pancreatic beta cell
8
3
2
1
pancreatic alpha cell
7
3
2
1
pancreatic acinar cell
6
3
2
1
pancreatic delta cell
5
4
2
1
+ See 12 more…
cell line
EndoC_BH1
8
1
8
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
Download