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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
accessible chromatin
54
target gene predictions
39
gene expression
24
candidate regulatory elements
17
chromatin state
15
eQTL
11
variant allelic effects
7
histone modifications
5
binding sites
3
Fine-mapped variants
1
differential activity
1
sQTL
Date released
March, 2023
44
September, 2022
43
May, 2021
32
February, 2021
25
February, 2024
20
January, 2021
18
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
4
June, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
March, 2024
Available data
170
bed bed3+
57
bigWig
35
tsv
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
242
Homo sapiens
Biosample type
110
tissue
87
primary cell
42
cell line
3
in vitro differentiated cells
Organ
909
epithelium
650
kidney
465
brain
453
connective tissue
373
musculature of body
310
lung
286
intestine
261
vasculature
255
heart
243
limb
230
pancreas
217
bodily fluid
215
embryo
206
blood
202
skin of body
199
blood vessel
172
large intestine
152
liver
146
extraembryonic component
117
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
81
uterus
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
43
spinal cord
33
spleen
25
nerve
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
204
AMP
20
T1D
18
ENCODE
Genome assembly (visualization)
197
hg19
62
GRCh38
month_released!
March, 2023
March, 2024
BIOSAMPLE
TYPE
242 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
differential activity
sQTL
tissue
islet of Langerhans
6
1
11
3
12
1
1
2
1
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 7 more…
primary cell
pancreatic ductal cell
6
3
2
1
2
1
pancreatic beta cell
8
3
2
1
pancreatic alpha cell
7
3
2
1
pancreatic acinar cell
6
3
2
1
pancreatic delta cell
5
4
2
1
+ See 8 more…
cell line
EndoC_BH1
8
1
8
1
1
pituitary stalk
10
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
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