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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
954
histone modifications
877
accessible chromatin
839
candidate regulatory elements
816
binding sites
634
gene expression
523
target gene predictions
167
differential activity
142
eQTL
140
variant allelic effects
102
chromatin state
74
Fine-mapped variants
13
caQTL
5
hQTL
4
sQTL
4
variant to gene
3
meQTL
3
other
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
August, 2021
128
March, 2020
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
35
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
14
November, 2019
14
October, 2019
9
August, 2018
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4193
bed bed3+
849
tsv
520
bigWig
83
txt
34
bed bed9+
31
bigBed bed9
27
bed bed9
24
csv
15
bigBed narrowPeak
1
bam
Organism
5253
Homo sapiens
Biosample type
1940
primary cell
1801
cell line
1220
tissue
334
in vitro differentiated cells
4
stem cell
Organ
775
epithelium
398
kidney
327
connective tissue
282
brain
225
pancreas
189
vasculature
168
musculature of body
142
blood vessel
140
bodily fluid
138
heart
136
blood
126
embryo
125
intestine
104
limb
102
skin of body
101
lung
100
liver
82
eye
76
large intestine
71
uterus
59
adipose tissue
53
artery
50
stomach
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
31
adrenal gland
27
small intestine
26
gonad
25
placenta
25
ureter
24
esophagus
19
spinal cord
17
vein
16
nerve
16
spleen
16
thymus
15
lymphatic vessel
14
testis
13
pituitary gland
11
ovary
11
thyroid gland
10
bone marrow
10
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4599
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
Genome assembly (visualization)
4370
hg19
990
GRCh38
month_released!
May, 2019
August, 2021
September, 2022
BIOSAMPLE
TYPE
5301 results
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table-tab-icon
Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
2
5
1
endothelial cell
1
14
2
6
7
1
2
2
fibroblast
16
1
4
2
6
hepatocyte
1
8
1
13
2
2
+ See 419 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
38
EndoC_BH1
1
8
1
8
1
3
1
K562
1
1
1
2
17
1
breast cancer cell
11
9
+ See 746 more…
tissue
islet of Langerhans
1
5
2
11
1
6
1
3
2
1
2
heart
1
5
18
1
2
1
2
2
retina
1
23
3
1
1
1
1
kidney
2
3
15
1
7
1
1
stomach
1
3
21
1
2
1
+ See 250 more…
in vitro differentiated cells
adipocyte
1
4
2
1
1
4
4
embryonic stem cell
1
6
1
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
+ See 119 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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