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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
24
gene expression
23
candidate regulatory elements
18
target gene predictions
17
chromatin state
14
histone modifications
13
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
46
September, 2022
29
February, 2024
26
February, 2021
10
August, 2021
10
March, 2020
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
May, 2021
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
October, 2022
1
September, 2018
Available data
98
bed bed3+
28
tsv
23
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
153
Homo sapiens
Biosample type
62
primary cell
57
tissue
27
cell line
7
in vitro differentiated cells
Organ
915
epithelium
651
kidney
451
brain
442
connective tissue
367
musculature of body
307
lung
283
intestine
262
vasculature
250
heart
244
pancreas
239
limb
214
bodily fluid
208
embryo
203
blood
200
blood vessel
199
skin of body
169
large intestine
153
liver
143
extraembryonic component
117
stomach
109
eye
89
bone element
86
adipose tissue
85
mammary gland
83
small intestine
81
uterus
76
prostate gland
72
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
148
AMP
5
ENCODE
Genome assembly (visualization)
121
hg19
60
GRCh38
2
hg18
month_released!
May, 2019
May, 2021
BIOSAMPLE
TYPE
153 results
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Clear Filters
accessible chromatin
gene expression
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
13
1
2
1
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
3
1
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
4
1
13
9
9
2
1
7
1
1
right lobe of liver
1
2
1
1
1
3
cell line
HepG2
2
2
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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