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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
51
candidate regulatory elements
40
target gene predictions
32
chromatin state
30
accessible chromatin
25
binding sites
24
gene expression
19
histone modifications
8
eQTL
5
variant allelic effects
4
differential activity
3
Fine-mapped variants
Date released
88
September, 2022
54
February, 2021
30
February, 2024
11
November, 2021
10
August, 2021
10
March, 2020
9
June, 2020
5
May, 2021
4
August, 2017
4
March, 2023
4
October, 2022
3
January, 2020
3
May, 2020
2
February, 2020
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
172
bed bed3+
28
bed bed9
28
tsv
26
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
241
Homo sapiens
Biosample type
109
primary cell
64
cell line
58
tissue
10
in vitro differentiated cells
Organ
947
epithelium
651
kidney
462
brain
457
connective tissue
370
musculature of body
311
lung
289
intestine
277
pancreas
265
vasculature
254
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
203
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
88
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
74
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
230
AMP
11
ENCODE
Genome assembly (visualization)
209
hg19
80
GRCh38
2
hg18
month_released!
May, 2019
May, 2022
BIOSAMPLE
TYPE
241 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
primary cell
hepatocyte
1
3
1
8
1
13
4
2
endothelial cell of hepatic sinusoid
6
6
4
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
1
4
hepatic stellate cell
1
1
1
3
1
1
1
+ See 5 more…
cell line
MCF-7
9
6
5
1
3
2
HepG2
2
3
2
2
3
5
T47D
3
2
2
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
+ See 2 more…
tissue
liver
13
10
9
3
1
1
2
7
1
right lobe of liver
2
1
1
1
1
3
mammary gland
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
See all biosamples
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