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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
227
candidate regulatory elements
177
target gene predictions
136
chromatin state
128
accessible chromatin
73
histone modifications
68
gene expression
51
eQTL
46
binding sites
42
Fine-mapped variants
30
variant allelic effects
14
differential activity
2
caQTL
2
pQTL
Date released
357
September, 2022
236
February, 2021
54
November, 2021
48
March, 2020
41
June, 2020
35
January, 2020
28
May, 2021
27
February, 2020
26
May, 2020
25
January, 2022
20
September, 2023
19
February, 2024
17
October, 2022
14
August, 2017
11
August, 2021
7
March, 2023
7
November, 2022
May, 2019
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
November, 2019
Available data
693
bed bed3+
132
tsv
122
bed bed9
74
bigWig
7
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
995
Homo sapiens
Biosample type
520
tissue
313
primary cell
107
cell line
54
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
651
kidney
462
brain
460
connective tissue
373
musculature of body
311
lung
289
intestine
277
pancreas
265
vasculature
254
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
203
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
74
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
916
AMP
54
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
879
hg19
290
GRCh38
2
hg18
month_released!
May, 2019
BIOSAMPLE
TYPE
996 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
gene expression
eQTL
binding sites
Fine-mapped variants
variant allelic effects
differential activity
caQTL
pQTL
tissue
brain
29
16
18
2
3
1
2
1
1
small intestine
29
17
15
1
1
adipose tissue
7
8
6
2
3
4
1
1
caudate nucleus
5
3
4
2
1
1
2
3
1
subcutaneous adipose tissue
2
1
2
5
6
3
1
1
+ See 70 more…
primary cell
fibroblast
4
16
2
1
6
pericyte cell
1
10
1
10
osteoblast
2
2
1
5
2
2
3
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
2
4
+ See 52 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 20 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
hippocampal neuron
1
1
+ See 11 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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