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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
153
accessible chromatin
151
candidate regulatory elements
119
target gene predictions
86
chromatin state
50
gene expression
38
binding sites
33
histone modifications
23
eQTL
18
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
234
September, 2022
155
February, 2021
57
November, 2021
29
June, 2020
29
November, 2022
25
February, 2023
19
February, 2024
19
May, 2021
17
September, 2023
14
October, 2022
12
January, 2020
12
May, 2020
11
August, 2021
11
February, 2020
9
March, 2020
7
August, 2017
7
January, 2022
7
March, 2023
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
Available data
524
bed bed3+
94
bigWig
79
bed bed9
67
tsv
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
695
Homo sapiens
Biosample type
327
primary cell
263
tissue
61
in vitro differentiated cells
43
cell line
1
stem cell
Organ
949
epithelium
651
kidney
462
brain
460
connective tissue
373
musculature of body
311
lung
289
intestine
277
pancreas
265
vasculature
254
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
203
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
74
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
612
AMP
57
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
619
hg19
171
GRCh38
2
hg18
month_released!
May, 2019
BIOSAMPLE
TYPE
695 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
trophoblast cell
1
7
5
4
1
osteoblast
5
2
2
1
2
3
2
fibroblast of lung
6
4
4
2
+ See 55 more…
tissue
placenta
1
26
15
14
1
2
1
retina
23
6
3
3
1
1
1
1
1
adipose tissue
2
7
8
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
pigmented layer of retina
20
+ See 16 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
1
mesenchymal stem cell
1
3
3
2
1
1
retinal pigment epithelial cell
6
chondrocyte
5
trophoblast cell
2
2
1
+ See 10 more…
cell line
WERI-Rb-1
1
2
1
1
2
1
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
HTR-8/Svneo
1
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
See all biosamples
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