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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
68
candidate regulatory elements
42
target gene predictions
36
chromatin state
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
5
May, 2021
3
August, 2017
February, 2024
3
November, 2021
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
124
bed bed3+
33
bed bed9
2
tsv
Organism
161
Homo sapiens
Biosample type
130
tissue
28
cell line
3
primary cell
Organ
687
epithelium
600
kidney
419
brain
360
connective tissue
336
musculature of body
295
lung
262
intestine
223
heart
222
limb
216
vasculature
202
pancreas
190
skin of body
178
bodily fluid
167
blood
166
blood vessel
161
large intestine
152
embryo
137
extraembryonic component
112
liver
109
stomach
81
small intestine
80
adipose tissue
79
mammary gland
74
bone element
72
prostate gland
69
placenta
65
adrenal gland
63
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
spinal cord
39
esophagus
32
spleen
29
uterus
24
testis
22
nerve
21
lymphoid tissue
21
ovary
21
vein
20
thyroid gland
18
mouth
17
lymphatic vessel
13
pituitary gland
12
breast
12
bronchus
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
158
AMP
3
ENCODE
Genome assembly (visualization)
157
hg19
38
GRCh38
month_released!
May, 2019
February, 2024
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
161 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
26
14
13
1
sigmoid colon
10
7
5
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 7 more…
cell line
HT-29
2
2
1
1
1
SW480
2
1
1
1
1
HCT116
2
1
1
HCT-116 cell
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
See all biosamples
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