Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
139
target gene predictions
131
candidate regulatory elements
102
accessible chromatin
77
chromatin state
76
binding sites
51
gene expression
49
histone modifications
24
eQTL
17
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
201
September, 2022
183
February, 2021
52
November, 2021
47
February, 2024
33
June, 2020
31
October, 2022
21
May, 2021
17
September, 2023
13
August, 2021
10
January, 2020
10
May, 2020
9
August, 2017
9
February, 2020
9
March, 2020
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
528
bed bed3+
68
bed bed9
67
tsv
56
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
690
Homo sapiens
Biosample type
295
primary cell
226
cell line
118
tissue
50
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
651
kidney
462
brain
460
connective tissue
373
musculature of body
311
lung
289
intestine
277
pancreas
265
vasculature
254
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
203
blood vessel
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
74
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
612
AMP
52
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
614
hg19
180
GRCh38
2
hg18
month_released!
May, 2019
BIOSAMPLE
TYPE
690 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
1
10
1
osteoblast
2
2
5
1
3
2
2
fibroblast of lung
4
6
4
2
foreskin fibroblast
2
6
1
1
4
2
+ See 47 more…
cell line
K562
23
7
1
7
2
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
1
2
1
GM19240
2
1
1
1
2
1
HAP-1
2
2
1
1
1
1
+ See 35 more…
tissue
adipose tissue
8
7
2
6
1
3
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
thyroid gland
5
8
1
4
1
omental fat pad
2
5
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
+ See 10 more…
in vitro differentiated cells
adipocyte
6
4
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download